Package: PhySortR
Type: Package
Title: A Fast, Flexible Tool for Sorting Phylogenetic Trees
Version: 1.0.9
Date: 2025-02-07
Authors@R: c(person("Timothy", "Stephens", email = "timothy.stephens1@uqconnect.edu.au", role = c("aut", "cre", "trl"), comment = "R port"),
  person("Debashish", "Bhattacharya", email = "Bhattacharya@AESOP.Rutgers.edu", role = c("aut")),
  person("Mark", "Ragan", email = "m.ragan@imb.uq.edu.au", role = c("aut")),
  person("Cheong Xin", "Chan", email = "c.chan1@uq.edu.au", role = c("aut", "cph"), comment = "Original Perl implementation"))
Maintainer: Timothy Stephens <timothy.stephens1@uqconnect.edu.au>
Description: Screens and sorts phylogenetic trees in both traditional
        and extended Newick format. Allows for the fast and flexible
        screening (within a tree) of Exclusive clades that comprise
        only the target taxa and/or Non- Exclusive clades that includes
        a defined portion of non-target taxa.
Depends: R (>= 3.0.0)
Imports: phytools, ape, methods
License: GPL (>= 3)
RoxygenNote: 7.3.2
Encoding: UTF-8
NeedsCompilation: no
Packaged: 2026-10-16 06:57:15 UTC; root
Author: Timothy Stephens [aut, cre, trl] (R port), Debashish
        Bhattacharya [aut], Mark Ragan [aut], Cheong Xin Chan [aut,
        cph] (Original Perl implementation)
Config/pak/sysreqs: libglpk-dev libxml2-dev
Repository: https://timothystephens.r-universe.dev
Date/Publication: 2025-02-13 01:55:56 UTC
RemoteUrl: https://github.com/cran/PhySortR
RemoteRef: HEAD
RemoteSha: ca09cd1814b44a730c021c2b5f21ec2ef09cd58f