Package: PhySortR 1.0.9

PhySortR: A Fast, Flexible Tool for Sorting Phylogenetic Trees

Screens and sorts phylogenetic trees in both traditional and extended Newick format. Allows for the fast and flexible screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non- Exclusive clades that includes a defined portion of non-target taxa.

Authors:Timothy Stephens [aut, cre, trl], Debashish Bhattacharya [aut], Mark Ragan [aut], Cheong Xin Chan [aut, cph]

PhySortR_1.0.9.tar.gz
PhySortR_1.0.9.zip(r-4.7)PhySortR_1.0.9.zip(r-4.6)PhySortR_1.0.9.zip(r-4.5)
PhySortR_1.0.9.tgz(r-4.6-any)PhySortR_1.0.9.tgz(r-4.5-any)
PhySortR_1.0.9.tar.gz(r-4.7-any)PhySortR_1.0.9.tar.gz(r-4.6-any)
PhySortR_1.0.9.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
PhySortR/json (API)

# Install 'PhySortR' in R:
install.packages('PhySortR', repos = c('https://timothystephens.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.48 score 1 stars 2 scripts 198 downloads 3 mentions 2 exports 35 dependencies

Last updated from:ca09cd1814. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK138
source / vignettesOK203
linux-release-x86_64OK150
macos-release-arm64OK142
macos-oldrel-arm64OK192
windows-develOK93
windows-releaseOK97
windows-oldrelOK92
wasm-releaseOK104

Exports:convert.eNewicksortTrees

Dependencies:apecliclusterGenerationcodacodetoolscombinatcpp11DEoptimdigestdoParallelexpmfastmatchforeachgenericsglueigraphiteratorslatticelifecyclemagrittrmapsMASSMatrixmnormtnlmenumDerivoptimParallelphangornphytoolspkgconfigquadprogRcpprlangscatterplot3dvctrs